CelloType
===================================

CelloType is an end-to-end Transformer-based method for automated cell/nucleus segmentation and cell type classification  

.. toctree::
   :maxdepth: 1
   :caption: Basics:

   installation
   quickstart

.. toctree::
   :maxdepth: 1
   :caption: Examples:

   notebooks/cell_segmentation
   inference_large
   notebooks/tissue_annotation
   
.. toctree::
   :maxdepth: 1
   :caption: Model Training:

   train_tn
   train_st
   train_codex